miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|198310953|gb|FL979785.1|FL979785 AAGCGGAGGATCAAGATGGCCCTTGATGTGGCCAAAGGCATGAATTGCCTGCACACTAGTGTACCTACAATAGTTCATCG
AGATCTGAAATCCCCAAACTTGCTGGTTGACAATAATTGGAATGTAAAGGTCTGCGACTTTGGACTTTCACGGTTGAAGC
ACAGTACGTTTTTGTCGTCCAAATCTACTGCTGGAACACCCGAGTGGATGGCACCTGAGGTTTTACGGAATGAACAATCA
AATGAAAAGTGCGACGTTTACAGCTTTGGTGTCATCTTGTGGGAACTGGCAACACTTAGAATGCCATGGAGTGGGATGAA
TCCAATGCAAGTTGTGGGGGCAGTTGGCTTCCAGGATAGACGGCTTGATATTCCAAAGGAAGTTGATCCTCTGGTAGCAA
GGATTATATACGAATGCTGGCAGAAGGACCCGAATCTGCGCCCTTCATTTTCACAGTTAACAAGTGCTCTGAAAACTGTT
CAAAGGCTAGTGACCCCTTCTCAGCAGGAGACACAGAGCCCCCCTGTTCATCAAGAAATCTCAGTGAATTCTACCCCTTG
AGAAGGGGGCCTTCCACTTTGCCTTGTGTGTAGTTTTTGTTCTTGCCGTTTGTGTTTCTCCAAAAGTCTACAAATGTGGG
TGCACCTTGTAGATTGAGCGCCCCAGTGGTAGACGTCCTGCTGCCGCGATAAGGCCTCCGCGGCAGAATATGTATAGAGC
CATCCGTCCATCAACTGAAATTGGAAGAAGCTGGAGTACTCCCTCCGTTCCAACTGAACGTCATTTTGGCAAATCTAG




Most similar to sp|Q05609|CTR1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1
            OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1
          Length = 821

 Score =  226 bits (575), Expect = 2e-58
 Identities = 110/166 (66%), Positives = 128/166 (77%)
 Frame = +1

Query: 1    KRRIKMALDVAKGMNCLHTSVPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSS 180
            +RR+ MA DVAKGMN LH   P IVHRDLKSPNLLVD  + VKVCDFGLSRLK STFLSS
Sbjct: 649  RRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 708

Query: 181  KSTAGTPEWMAPEVLRNEQSNEKCDVYSFGVILWELATLRMPWSGMNPMQVVGAVGFQDR 360
            KS AGTPEWMAPEVLR+E SNEK DVYSFGVILWELATL+ PW  +NP QVV AVGF+ +
Sbjct: 709  KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 768

Query: 361  RLDIPKEVDPLVARIIYECWQKDPNLRPSFSQLTSALKTVQRLVTP 498
            RL+IP+ ++P VA II  CW  +P  RPSF+ +   L+ + +   P
Sbjct: 769  RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 814